PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0199s0350.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 180aa    MW: 19985.4 Da    PI: 9.8786
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0199s0350.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.7e-20553153
                     AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                            ++++GVr+++ +g+Wv+eIr+p        +r++lg+f+taeeAa+a+++a+  +
  SapurV1A.0199s0350.1.p  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFDTAEEAARAYDEAAVLM 53
                            59*******9.**********8.....334*********************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.11E-31565No hitNo description
Gene3DG3DSA:3.30.730.103.7E-33664IPR001471AP2/ERF domain
SMARTSM003806.1E-40669IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-20664IPR016177DNA-binding domain
PfamPF008471.8E-12650IPR001471AP2/ERF domain
PROSITE profilePS5103221.852663IPR001471AP2/ERF domain
PRINTSPR003677.5E-11718IPR001471AP2/ERF domain
PRINTSPR003677.5E-112945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MAQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFDTAE EAARAYDEAA VLMSGRSAKT  60
NFPVVANQTR DAQSSSSSSS SSSSSALSAK LRRYCRSPYP SLTCLRLDAE NRHIGVWQER  120
AGPHSVSDWI MTVELGKKEQ KTLISDTSSK MAGREGGGDD GLDDEQRVAL QMIEELLNR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-17267167ATERF1
3gcc_A3e-17267167ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006385318.11e-101hypothetical protein POPTR_0003s02750g
SwissprotQ9XI337e-73WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLB9MWP81e-101B9MWP8_POPTR; Uncharacterized protein
STRINGPOPTR_0003s02750.11e-100(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57633144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.13e-58ERF family protein